BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014F07SP1|AL426717
(741 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1669 1469 0.0
>3x_Contig1669
Length = 15503
Score = 1469 bits (741), Expect = 0.0
Identities = 741/741 (100%)
Strand = Plus / Minus
Query: 1 atcttcactacttgtaagaggatggacgacagcgtagtgtctgcccattgtcatatattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9689 atcttcactacttgtaagaggatggacgacagcgtagtgtctgcccattgtcatatattg 9630
Query: 61 tgcgacatgacaaattacactcaatccgacaaatgcacagaatatacccaccatggaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9629 tgcgacatgacaaattacactcaatccgacaaatgcacagaatatacccaccatggaact 9570
Query: 121 gtgcaccctaggatacgtgtttgttgagaagatagtgcacataagcaaagccaattcacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9569 gtgcaccctaggatacgtgtttgttgagaagatagtgcacataagcaaagccaattcacc 9510
Query: 181 tatacttcctagtacgaatgaggcccatactagattccgttcatgtttggtaaaaaatgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9509 tatacttcctagtacgaatgaggcccatactagattccgttcatgtttggtaaaaaatgg 9450
Query: 241 aggcatgacatatttcttctgaattaaagcttcgatgtagttcgattccattatagagct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9449 aggcatgacatatttcttctgaattaaagcttcgatgtagttcgattccattatagagct 9390
Query: 301 atcgttagatttttctaagtcatcatgataagtatacggtaacttgaaaggccaatgacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9389 atcgttagatttttctaagtcatcatgataagtatacggtaacttgaaaggccaatgacc 9330
Query: 361 agatctttgaaaatactctagagcaaccatgattacgtatcctagaccttgccatgccgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9329 agatctttgaaaatactctagagcaaccatgattacgtatcctagaccttgccatgccgc 9270
Query: 421 acaagaaataaacaacggttttaaattggtcgcaccaatatgggatatataaaccgggaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9269 acaagaaataaacaacggttttaaattggtcgcaccaatatgggatatataaaccgggaa 9210
Query: 481 ctggtctgtatgcatgaaccaataaatgggatgaccttgtcctgcccaacatgccaacat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9209 ctggtctgtatgcatgaaccaataaatgggatgaccttgtcctgcccaacatgccaacat 9150
Query: 541 cgcaattagcatcccataccatggaatgaaagctatccagggaaagataaaccagtagtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9149 cgcaattagcatcccataccatggaatgaaagctatccagggaaagataaaccagtagtt 9090
Query: 601 acctggacgtggaaacatattagtatagtcttgcggtttacgtttatacctgtatcaaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9089 acctggacgtggaaacatattagtatagtcttgcggtttacgtttatacctgtatcaaat 9030
Query: 661 ccaatccttatgagaatgtctaccagtgatattctttaaaggaatgagctatgttgacct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9029 ccaatccttatgagaatgtctaccagtgatattctttaaaggaatgagctatgttgacct 8970
Query: 721 tgtcccgtcaaattcggctgg 741
|||||||||||||||||||||
Sbjct: 8969 tgtcccgtcaaattcggctgg 8949
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4321
Number of Sequences: 1807
Number of extensions: 4321
Number of successful extensions: 24
Number of sequences better than 1.0e-20: 1
length of query: 741
length of database: 10,358,551
effective HSP length: 16
effective length of query: 725
effective length of database: 10,329,639
effective search space: 7488988275
effective search space used: 7488988275
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)